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Conceptual models	Coastal indicators	Habitat Mapping
Introduction Classification Typology Beaches Estuaries Classification map Climate and seasonality Climate graphs Climatic regions Climatic variance Environment types Science Conceptual models Beach geomorphic Wave-dominated beaches Tide-modified beaches Tide-dominated beaches Beaches plus rock/reef flats Estuarine biophysical Embayments & drowned river valleys Embayments & drowned river valleys Physical characteristics Sedimentary environments Hydrology Sediment transport Nitrogen dynamics Wave-dominated estuaries Wave-dominated estuaries Physical characteristics Sedimentary environments Positive Hydrology Negative Hydrology Sediment transport Nitrogen dynamics Wave-dominated deltas Wave-dominated deltas Physical characteristics Sedimentary environments Hydrology Sediment transport Nitrogen dynamics Coastal lagoons & strandplains Coastal lagoons & strandplains Sedimentary environments Hydrology Sediment transport Nitrogen dynamics Tide-dominated estuaries Tide-dominated estuaries Physical characteristics Sedimentary environments Positive Hydrology Negative Hydrology Sediment transport Nitrogen dynamics Tide-dominated deltas Tide-dominated deltas Physical characteristics Sedimentary environments Hydrology Sediment transport Nitrogen dynamics Tidal creeks Tidal creeks Sedimentary environments Hydrology Sediment transport Nitrogen dynamics Further information Evolution Geomorphic model development Sedimentary environments Process models Hydrological processes Sediment trapping and stabilisation Physical habitat Food webs Nutrient cycling Mangrove community dynamics Threat models Dredging Draining and Infill Stressor models Altered pH Aquatic sediments Disturbance to biota Excess nutrients Freshwater flow regime Habitat removal/disturbance Hydrodynamics Litter Organic matter Pathogens Pest species Toxicants Build your own model External links References Estuary Beach Acknowledgements	Introduction Coastal issues Declining water quality Acid sulfate soils Algal blooms Anoxic and hypoxic events Eutrophication Fine sediment loads Fish kills Freshwater flows Shellfish quality & closures Climate change Beach erosion Climate change Global warming Ocean acidification Saline intrusion Sea level rise Vector borne diseases Habitat/species alterations Beach erosion Biodiversity Habitat loss Hydrodynamic alteration Marine pest invasions Economic values and consequences Acid sulfate soils Algal blooms Commercial fisheries Declining biodiversity Human-made capital Mangrove removal Marine pest invasions Recreational fisheries Biophysical indicators Water quality Chlorophyll a CO2 partial pressure Dissolved oxygen Marine pathogens Metal contaminants pH Salinity Turbidity Water column nutrients Water temperature Sediment quality Benthic CO2 flux Denitrification efficiency Organic matter & nutrients Sediment P/R ratio Sedimentation rates Sediment TOC:TS ratios Toxicants Habitat extent & quality Beach & dune indicators Changes in mangrove areas Changes in salt marsh areas Changes in seagrass areas Changes in wetland coverage Index of habitat variability Isohaline position Maturity index & lifespan Biotic indicators Benthic invertebrates Diatom species composition Fish assemblages Hermit crabs Imposex frequency Intertidal invertebrates Macroalgal indicators Seagrass species Shorebird counts Pressure indicators Agricultural Impoundment density Percent of agriculture on steep slopes Percent of agricultural land area Pesticide hazard Rivers through forest Industrial Aquaculture pressure Coastal tourism Fishing pressure Industrial point source hazard Shipping, boating and yachting Urban Coastal discharges Coastal population Nutrient point source hazard Stormwater discharges Catchment condition Catchment condition index Native vegetation extent Rivers in acid hazard Coastal management indicators Coastal care community groups Marine network participation Marine protected areas Acknowledgements Content contributors Other contributors	Coastal water habitat mapping toolkit Introduction Benthic habitat mapping Introduction Mapping overview Why make habitat maps How to describe habitats Types of data used Species modelling Mapping for ecological analysis Fish sampling Techniques Introduction Broad-scale acoustic sensors Single beam echo sounder acoustic sediment classification Multi-beam and swath sounders Side Scan Sonar Seismic and sub-bottom reflection List of references Airborne electro-optical sensors Aerial photography Hydrographic LADS/LIDAR Airborne hyperspectral imaging Satellite multiSpectral Fine-scale physical sampling Geophysical Grab sampling Gravity drop and piston coring Sediment vibrocoring Underwater electro-optical sensors Sediment profile imaging Underwater photography Underwater video imaging Laser line imaging Underwater fish measurements Position Fixing Differential GPS and subsea tracking Case studies Introduction Abrolhos Bowling Green Bay Cape Byron Marine Park Cockburn Sound Fitzroy River/Keppel Bay Marmion Marine Park Moreton Bay Parks Victoria Recherche Archipelago Sydney Other studies Decision tree Introduction Remote sensing toolkit Table linking survey techniques to case studies Knowledge base Survey standards & deliverables References Useful links Reports and publications Photo and video gallery Acknowledgements Partners Project highlights Key benefits Regional mapping studies New South Wales marine habitat mapping Mangroves and coastal saltmarsh of Victoria – distribution, condition, threats and management Interactive 3D models Introduction Cockburn Sound Keppel Bay Sydney Harbour Woody Island

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